Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849289.1_cds_XP_016510736.1_23546
CDS Infomation

[gene=LOC107828000] [db_xref=GeneID:107828000] [protein=auxin response factor 18-like] [protein_id=XP_016510736.1] [location=join(34058..35038,35642..36525,36628..36690,36896..36977)] [gbkey=CDS]
Sequence

ATGAAGGAGGCGATAGAGAAGTGTGTGGACTCTCAGCTATGGCACGCCTGTGCAGGAAGC
ATGGTGCAAATTCCTCCATTAAACTCCAACATCTTCTATTTCCCACAAGGCCATGCTGAG
CATACATCTACAGATGTTGATTTCACTGCTCTGCCGAGAATTTCTGCTATGATTCTATGC
AGGGTCAATGCTGTAAAATTCTTAGCTGACCCTGAAACTGATGAGATTTATGCCAAGATT
ATGCTTATTCCGGTTGAAAACAAGAACCATGACTTTGAAAATGACACTGTTTTAGGAAGC
AGTGCGGTTGAAACAACTGAGAAGCCTAGTTCGTTCGCCAAGACGTTGACTCAATCGGAT
GCAAATAACGGGGGTGGTTTTTCAGTTCCTAGGTACTGTGCAGAGACAATTTTCCCGAGG
TTGGATTTTACAGCTGAGCCTCCTGTCCAGACTGTGATCGCGAAGGATGTTCATGGTGCA
ATCTGGAAGTTCAGGCACATCTATAGGGGCACGCCACGGAGGCATTTGTTGACAACTGGT
TGGAGTTCATTTGTGAATCAGAAGAAGCTGGTTGCAGGGGACTCTGTTGTGTTTCTGAGG
GCAGAAAATGGTGATCTTTGTGTTGGAATTCGCAGGGTAAAGCGGGGTGGTATTGGTGGG
ATGGAACTGAATTCTTCTGGTGGGAGATTTAGAGATAAGGGACAAGTGAGCCCTGAATCA
GTTGTTAAGGCTGCATATCTCGCTGCTAGTGGCCAGCGTTTTGAAATTGTTTATTACCCT
CGTGCAAGCTCTCCTGAATTTTGTGTTAGGGCGTCTTCTGTGAATGCTGCAATGAACGTT
CAATGGTGCTCAGGGATGAGGTTCAAAATGGCTTTTGAAACCGAGGATTCTTCTCGGATC
AGCTGGTTCATGGGAAGTATATCATCGGTTCAGGTTGCTGACCCCATCCGCTGGCCTCAT
TCACCTTGGCGGCTTCTTCAGGTGACATGGGATGAACCAGATTTACTGCAAAATGTAAAA
CATGTCAGCCCATGGCTTGTCGAATTGGTCTCTAATATGCCCGTCATTCACTTATCACAC
TTCTCACCACCAAGGAAAAAGTTGTGTTTACCGCAAGATTTTGCACTTGACAGTCAATTT
CCATTACCTTCATTTTTGGGCAACCCCCTCAGGTCCAGCAGTCCTTTTTGTTGTCTATCT
GACAACATCACTGCAGGCATACAGGGAGCCAGGCATGCTCAGTTTGGAGTACCTTTATTG
GATCTCCAACTTAGCAAAAAAATTCAGTTGGGACTGCTACCACCCGTTTCCCAACCACTC
GATGCTGATTCTAGAATTCCTAATGGCATCAGTAAGGTCCAAAAAGAGAGCAACGAAAAC
ATATCTTGCTTGCTTACCATGGGTAGTTCTAGTCAGATGTTGGATAAAGCTGATAATTTG
AAAACACCTCGGTTTTTACTCTTTGGCCAACCAATTCTCACTGAGCAGCAAATGTCAAGT
GGCCGCTCTACTAATGTTCCTCCACAAGTCCAAACAAAAAGAGACTCCTCCGGTGAGGCA
CAAATGGAAACTGAAAGAATTTCTCTTGGCTGGAAAGGCCTTTCAGAAAGTCTATCAAAC
GCTACATTACTTTGGAATAAAGGTTATCACGCAGCTGAACTTGGCATGAGTACTGGTCAC
TGCAAAGTATTCCTAGATTCGGAGGATGTAGGACATGCCCTTGATATCTCAGTTTTAAGA
TCATATGAAGAGGTGTATAAAAAACTTGCAGACATTTTTGGATTAGAAAGATTAGATATG
ATGACACGTGTACTCTATATAGATGCAACAGGTGCATCTAGACAAATTGGAGATGCACCA
TTCAGTGACTTTGTGAAGACTGCAAAAAGACTGACAATTCTGAAGAATCCTGACAACAGT
GCTGCAAGGAAATGGCTCACCGATCTGCCAACTGCTGAAGGTTGTCTAGATTCTTCAAAC
CAGGCAGGATCCCTTAGCATCTTTGCGTAA

Peptide Sequence

PEP ID

XP_016510736.1
PEP Infomation

PREDICTED: auxin response factor 18-like [Nicotiana tabacum]
Sequence

MKEAIEKCVDSQLWHACAGSMVQIPPLNSNIFYFPQGHAEHTSTDVDFTALPRISAMILC
RVNAVKFLADPETDEIYAKIMLIPVENKNHDFENDTVLGSSAVETTEKPSSFAKTLTQSD
ANNGGGFSVPRYCAETIFPRLDFTAEPPVQTVIAKDVHGAIWKFRHIYRGTPRRHLLTTG
WSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRVKRGGIGGMELNSSGGRFRDKGQVSPES
VVKAAYLAASGQRFEIVYYPRASSPEFCVRASSVNAAMNVQWCSGMRFKMAFETEDSSRI
SWFMGSISSVQVADPIRWPHSPWRLLQVTWDEPDLLQNVKHVSPWLVELVSNMPVIHLSH
FSPPRKKLCLPQDFALDSQFPLPSFLGNPLRSSSPFCCLSDNITAGIQGARHAQFGVPLL
DLQLSKKIQLGLLPPVSQPLDADSRIPNGISKVQKESNENISCLLTMGSSSQMLDKADNL
KTPRFLLFGQPILTEQQMSSGRSTNVPPQVQTKRDSSGEAQMETERISLGWKGLSESLSN
ATLLWNKGYHAAELGMSTGHCKVFLDSEDVGHALDISVLRSYEEVYKKLADIFGLERLDM
MTRVLYIDATGASRQIGDAPFSDFVKTAKRLTILKNPDNSAARKWLTDLPTAEGCLDSSN
QAGSLSIFA

Transcript Sequence

Gene sequence data has not been registered.